Gene Information | |
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Gene Name | VCP |
Organism | Homo sapiens (Human) |
Gene Length | 806 |
Protein Names | Transitional endoplasmic reticulum ATPase (TER ATPase) (EC 3.6.4.6) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) |
Target Name | valosin-containing protein p97 |
Target Type | Clinical trial target |
Gene Age | 1488 ( ENSG00000165280 ) |
Evolutionary Stage | Cellular_organisms |
AlphaFoldDB | P55072 |
Gene Card | VCP |
Uniprot ID | P55072 |
Pfam | PF00004; PF17862; PF02933; PF02359; PF09336 |
In ASD | yes |
Allosteric Prediction | yes (1.251590389) |
Ortholog in Animals | Alpaca_ VCP ( ortholog_one2one ) Dog_ VCP ( ortholog_one2one ) GuineaPig_ VCP ( ortholog_one2one ) Macaque_ VCP ( ortholog_one2one ) Mouse_ Vcp ( ortholog_one2one ) Pig_ VCP ( ortholog_one2one ) Rat_ Vcp ( ortholog_one2one ) Rabbit_ VCP ( ortholog_one2one ) |
Ohnologs | NA |
Paralogs | PEX6, NVL, SPATA5L1, PEX1, SPATA5 |
Tissue | NA |
Tissue Specificity | NA |
Pharmacological Animal Models | NULL(Chimpanzee);NULL(Mouse);0.002556(Rat);0.054348(Rabbit) |
Gene Ontology (biological process) |
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Gene Ontology (cellular component) |
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Gene Ontology (molecular function) |
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PDB | 3EBB (X-ray 1.90A ) 3HU1 (X-ray 2.81A ) 3HU2 (X-ray 2.85A ) 3HU3 (X-ray 2.20A ) 3QC8 (X-ray 2.20A ) 3QQ7 (X-ray 2.65A ) 3QQ8 (X-ray 2.00A ) 3QWZ (X-ray 2.00A ) 3TIW (X-ray 1.80A ) 4KDI (X-ray 1.86A ) 4KDL (X-ray 1.81A ) 4KLN (X-ray 2.62A ) 4KO8 (X-ray 1.98A ) 4KOD (X-ray 2.96A ) 4P0A (X-ray 2.30A ) 5B6C (X-ray 1.55A ) 5C18 (X-ray 3.30A ) 5C19 (X-ray 4.20A ) 5C1A (X-ray 3.80A ) 5C1B (X-ray 3.08A ) 5DYG (X-ray 2.20A ) 5DYI (X-ray 3.71A ) 5EPP (X-ray 1.88A ) 5FTJ (EM 2.30A ) 5FTK (EM 2.40A ) 5FTL (EM 3.30A ) 5FTM (EM 3.20A ) 5FTN (EM 3.30A ) 5GLF (X-ray 2.25A ) 5IFS (X-ray 2.46A ) 5IFW (X-ray 3.40A ) 5KIW (X-ray 3.41A ) 5KIY (X-ray 2.79A ) 5X4L (X-ray 2.40A ) 6G2V (X-ray 1.90A ) 6G2W (X-ray 2.68A ) 6G2X (X-ray 2.08A ) 6G2Y (X-ray 2.15A ) 6G2Z (X-ray 1.92A ) 6G30 (X-ray 2.42A ) 6HD0 (X-ray 3.73A ) 6MCK (X-ray 3.77A ) 7BP8 (EM 3.90A ) 7BP9 (EM 3.60A ) 7BPA (EM 3.30A ) 7BPB (EM 4.30A ) 7JY5 (EM 2.89A ) 7K56 (EM 3.90A ) 7K57 (EM 3.70A ) 7K59 (EM 4.20A ) 7L5W (EM 3.34A ) 7L5X (EM 6.10A ) 7LMY (EM 2.40A ) 7LMZ (EM 3.06A ) 7LN0 (EM 2.98A ) 7LN1 (EM 3.40A ) 7LN2 (EM 3.63A ) 7LN3 (EM 3.45A ) 7LN4 (EM 3.00A ) 7LN5 (EM 3.09A ) 7LN6 (EM 3.58A ) 7MDM (EM 4.86A ) 7MDO (EM 4.12A ) 7MHS (EM 3.60A ) 7OAT (X-ray 3.00A ) 7R7S (EM 4.23A ) 7R7T (EM 4.50A ) 7R7U (EM 4.30A ) 7RL6 (EM 3.70A ) 7RL7 (EM 3.00A ) 7RL9 (EM 3.30A ) 7RLA (EM 3.10A ) 7RLB (EM 3.30A ) 7RLC (EM 3.20A ) 7RLD (EM 3.40A ) 7RLF (EM 3.10A ) 7RLG (EM 3.70A ) 7RLH (EM 3.00A ) 7RLI (EM 3.10A ) 7RLJ (EM 3.80A ) 7VCS (EM 3.32A ) 7VCT (EM 3.21A ) 7VCU (EM 3.15A ) 7VCV (EM 3.21A ) 7VCX (EM 3.24A ) |
DBSNP | rs121909332 rs864309502 rs121909330 rs121909329 rs121909329 rs121909329 rs121909330 rs387906789 rs121909335 rs864309501 rs121909334 rs748447593 rs121909331 rs1554668420 rs387906790 |
Subcellular location [CC] | Cytoplasm, cytosol {ECO:0000269|PubMed:15456787}. Endoplasmic reticulum {ECO:0000269|PubMed:15215856}. Nucleus {ECO:0000269|PubMed:23042605, ECO:0000269|PubMed:26842564}. Cytoplasm, Stress granule {ECO:0000269|PubMed:29804830}. Note=Present in the neuronal hyaline inclusion bodies specifically found in motor neurons from amyotrophic lateral sclerosis patients (PubMed:15456787). Present in the Lewy bodies specifically found in neurons from Parkinson disease patients (PubMed:15456787). Recruited to the cytoplasmic surface of the endoplasmic reticulum via interaction with AMFR/gp78 (PubMed:16168377). Following DNA double-strand breaks, recruited to the sites of damage (PubMed:22120668). Recruited to stalled replication forks via interaction with SPRTN (PubMed:23042605). Recruited to damaged lysosomes decorated with K48-linked ubiquitin chains (PubMed:27753622). Colocalizes with TIA1, ZFAND1 and G3BP1 in cytoplasmic stress granules (SGs) in response to arsenite-induced stress treatment (PubMed:29804830). {ECO:0000269|PubMed:15456787, ECO:0000269|PubMed:16168377, ECO:0000269|PubMed:22120668, ECO:0000269|PubMed:23042605, ECO:0000269|PubMed:27753622, ECO:0000269|PubMed:29804830}. |
Mouse PG classification | NA |
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