Gene Information | |
---|---|
Gene Name | PABPC1 |
Organism | Homo sapiens (Human) |
Gene Length | 636 |
Protein Names | Polyadenylate-binding protein 1 (PABP-1) (Poly(A)-binding protein 1) |
Target Name | polyadenylate-binding protein 1 |
Target Type | Clinical trial target |
Gene Age | 544 ( ENSG00000070756 ) |
Evolutionary Stage | Eukaryota |
AlphaFoldDB | P11940 |
Gene Card | PABPC1 |
Uniprot ID | P11940 |
Pfam | PF00658; PF00076 |
In ASD | yes |
Allosteric Prediction | yes (0.821561665) |
Ortholog in Animals | Alpaca_ PABPC1 ( ortholog_one2one ) Dog_ PABPC1 ( ortholog_one2one ) Macaque_ PABPC1 ( ortholog_one2one ) Mouse_ Pabpc2 ( ortholog_one2many ) Mouse_ Pabpc6 ( ortholog_one2many ) Pig_ PABPC1 ( ortholog_one2one ) Rat_ Pabpc2 ( ortholog_one2many ) Rat_ Pabpc6 ( ortholog_one2many ) |
Ohnologs | PABPC1L, PABPC4 |
Paralogs | PABPC3, RBMS2, RBM24, ELAVL4, ELAVL3, RBMS1, ELAVL2, PUF60, RBM34, RBM45, HNRNPR, SYNCRIP, PABPC1L, PABPC5, RBM14, PABPC1L2A, PABPC1L2B, SF3B4, RBM38, ELAVL1, TARDBP, RBMS3, PABPC4, PABPC4L |
Tissue | NA |
Tissue Specificity | Ubiquitous. |
Pharmacological Animal Models | NULL(Chimpanzee);NULL(Mouse);NULL(Rat);0.05(Rabbit) |
Gene Ontology (biological process) |
|
Gene Ontology (cellular component) |
|
Gene Ontology (molecular function) |
|
PDB | 1CVJ (X-ray 2.60A ) 1G9L (NMR - ) 1JGN (NMR - ) 1JH4 (NMR - ) 2K8G (NMR - ) 2RQG (NMR - ) 2RQH (NMR - ) 2X04 (X-ray 1.49A ) 3KTP (X-ray 1.50A ) 3KTR (X-ray 1.70A ) 3KUI (X-ray 2.30A ) 3KUJ (X-ray 1.40A ) 3KUR (X-ray 2.50A ) 3KUS (X-ray 1.40A ) 3KUT (X-ray 1.50A ) 3PKN (X-ray 1.80A ) 3PTH (X-ray 1.70A ) 4F02 (X-ray 2.00A ) 4F25 (X-ray 1.90A ) 4F26 (X-ray 2.00A ) 5DX1 (X-ray 1.93A ) 5DX8 (X-ray 1.94A ) 5DXA (X-ray 2.07A ) 5LGP (X-ray 2.04A ) 5LGQ (X-ray 2.11A ) 5LGR (X-ray 2.00A ) 5LGS (X-ray 2.10A ) 7BN3 (X-ray 1.93A ) |
DBSNP | NA |
Subcellular location [CC] | Cytoplasm {ECO:0000269|PubMed:20573744, ECO:0000269|PubMed:21883093, ECO:0000269|PubMed:28733330, ECO:0000269|PubMed:31649314, ECO:0000269|PubMed:7908267, ECO:0000269|PubMed:9582337}. Cytoplasm, Stress granule {ECO:0000269|PubMed:21883093, ECO:0000269|PubMed:22872150, ECO:0000269|PubMed:27573237}. Nucleus {ECO:0000269|PubMed:18799579, ECO:0000269|PubMed:9582337}. Cell projection, lamellipodium {ECO:0000269|PubMed:28733330}. Note=Localized in cytoplasmic mRNP granules containing untranslated mRNAs (PubMed:17289661). Shuttles between the cytoplasm and the nucleus (PubMed:9582337). During stress and in the absence of DDX3X, localizes to the nucleus (PubMed:21883093). At the leading edge of migrating fibroblasts, colocalizes with DDX3X (PubMed:28733330). Relocalizes to cytoplasmic stress granules upon cellular stress where it colocalizes with ENDOV (PubMed:27573237). In case of HRSV infection, localizes in cytoplasmic inclusion bodies substructures called inclusion bodies associated granules (IBAGs) (PubMed:31649314). {ECO:0000269|PubMed:17289661, ECO:0000269|PubMed:21883093, ECO:0000269|PubMed:28733330, ECO:0000269|PubMed:31649314, ECO:0000269|PubMed:9582337}. |
Mouse PG classification | NA |
click here to return to the previous page |