| Gene Information | |
|---|---|
| Gene Name | NTRK1 |
| Organism | Homo sapiens (Human) |
| Gene Length | 796 |
| Protein Names | High affinity nerve growth factor receptor (EC 2.7.10.1) (Neurotrophic tyrosine kinase receptor type 1) (TRK1-transforming tyrosine kinase protein) (Tropomyosin-related kinase A) (Tyrosine kinase receptor) (Tyrosine kinase receptor A) (Trk-A) (gp140trk) (p140-TrkA) |
| Target Name | tropomyosin-related kinase a |
| Target Type | Successful target |
| Gene Age | 454 ( ENSG00000198400 ) |
| Evolutionary Stage | Vertebrata |
| AlphaFoldDB | P04629 |
| Gene Card | NTRK1 |
| Uniprot ID | P04629 |
| Pfam | PF13855; PF16920; PF07714; PF18613 |
| In ASD | yes |
| Allosteric Prediction | yes (2.538987698) |
| Ortholog in Animals | Alpaca_ NTRK1 ( ortholog_one2one ) Dog_ NTRK1 ( ortholog_one2one ) GuineaPig_ NTRK1 ( ortholog_one2one ) Macaque_ NTRK1 ( ortholog_one2one ) Mouse_ Ntrk1 ( ortholog_one2one ) Pig_ NTRK1 ( ortholog_one2one ) Rat_ Ntrk1 ( ortholog_one2one ) Rabbit_ NTRK1 ( ortholog_one2one ) |
| Ohnologs | MUSK, NTRK3, NTRK2 |
| Paralogs | EPHA7, EPHB3, ALK, FGFR3, EPHA2, LMTK2, EPHB1, EPHA3, INSR, PDGFRA, EGFR, CSF1R, ERBB3, KIT, NTRK3, DDR1, ERBB4, EPHA8, TEK, MUSK, MERTK, FGFR4, FLT3, EPHB6, FLT1, DDR2, EPHA6, NTRK2, IGF1R, INSRR, EPHB4, PDGFRB, ERBB2, KDR, EPHA5, FGFR2, TYRO3, MST1R, AXL, EPHB2, ROR1, ROR2, ROS1, EPHA10, EPHA4, RET, LTK, FLT4, TIE1, FGFR1, RYK, EPHA1, MET |
| Tissue | NA |
| Tissue Specificity | Isoform TrkA-I is found in most non-neuronal tissues. Isoform TrkA-II is primarily expressed in neuronal cells. TrkA-III is specifically expressed by pluripotent neural stem and neural crest progenitors. {ECO:0000269|PubMed:15488758, ECO:0000269|PubMed:8325889}. |
| Pharmacological Animal Models | NULL(Chimpanzee);NULL(Mouse);NULL(Rat);0.070588(Rabbit) |
| Gene Ontology (biological process) |
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| Gene Ontology (cellular component) |
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| Gene Ontology (molecular function) |
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| PDB | 1HE7 (X-ray 2.00A ) 1SHC (NMR - ) 1WWA (X-ray 2.50A ) 1WWW (X-ray 2.20A ) 2IFG (X-ray 3.40A ) 2N90 (NMR - ) 4AOJ (X-ray 2.75A ) 4CRP (NMR - ) 4F0I (X-ray 2.30A ) 4GT5 (X-ray 2.40A ) 4PMM (X-ray 2.00A ) 4PMP (X-ray 1.80A ) 4PMS (X-ray 2.80A ) 4PMT (X-ray 2.10A ) 4YNE (X-ray 2.02A ) 4YPS (X-ray 2.10A ) 5H3Q (X-ray 2.10A ) 5I8A (X-ray 2.33A ) 5JFS (X-ray 2.07A ) 5JFV (X-ray 1.59A ) 5JFW (X-ray 1.52A ) 5JFX (X-ray 1.63A ) 5KMI (X-ray 1.87A ) 5KMJ (X-ray 2.04A ) 5KMK (X-ray 2.24A ) 5KML (X-ray 2.01A ) 5KMM (X-ray 2.12A ) 5KMN (X-ray 2.14A ) 5KMO (X-ray 2.67A ) 5KVT (X-ray 2.45A ) 5WR7 (X-ray 2.76A ) 6D1Y (X-ray 1.93A ) 6D1Z (X-ray 1.87A ) 6D20 (X-ray 1.94A ) 6D22 (X-ray 2.46A ) 6DKB (X-ray 2.68A ) 6DKG (X-ray 2.53A ) 6DKI (X-ray 2.11A ) 6DKW (X-ray 2.91A ) 6IQN (X-ray 2.54A ) 6J5L (X-ray 2.30A ) 6NPT (X-ray 2.19A ) 6NSP (X-ray 2.31A ) 6NSS (X-ray 1.97A ) 6PL1 (X-ray 2.03A ) 6PL2 (X-ray 2.59A ) 6PL3 (X-ray 3.00A ) 6PL4 (X-ray 2.06A ) 6PMA (X-ray 2.53A ) 6PMB (X-ray 2.81A ) 6PMC (X-ray 2.19A ) 6PME (X-ray 3.00A ) 7N3T (X-ray 1.84A ) 7XAF (X-ray 3.00A ) |
| DBSNP | rs201472270 rs1007211 rs55891455 rs543320028 rs540521894 rs747711259 rs55909005 rs56000394 rs35116695 rs121964869 rs56320207 rs34900547 rs144901788 rs606231467 rs1571699266 rs55892037 rs121964866 rs121964870 rs6336 rs6339 rs786205449 rs369353892 rs764992664 rs80356677 rs121964868 rs770727871 rs1324983370 rs35669708 rs35669708 rs55948542 |
| Subcellular location [CC] | Cell membrane {ECO:0000269|PubMed:1281417, ECO:0000269|PubMed:15488758, ECO:0000269|PubMed:17196528, ECO:0000269|PubMed:27676246, ECO:0000269|PubMed:2927393}; Single-pass type I membrane protein {ECO:0000269|PubMed:1281417, ECO:0000269|PubMed:15488758}. Early endosome membrane {ECO:0000250|UniProtKB:P35739}; Single-pass type I membrane protein {ECO:0000250|UniProtKB:P35739}. Late endosome membrane {ECO:0000250|UniProtKB:P35739}; Single-pass type I membrane protein {ECO:0000250|UniProtKB:P35739}. Recycling endosome membrane {ECO:0000250|UniProtKB:P35739}; Single-pass type I membrane protein {ECO:0000250|UniProtKB:P35739}. Note=Rapidly internalized after NGF binding (PubMed:1281417). Internalized to endosomes upon binding of NGF or NTF3 and further transported to the cell body via a retrograde axonal transport. Localized at cell membrane and early endosomes before nerve growth factor (NGF) stimulation. Recruited to late endosomes after NGF stimulation. Colocalized with RAPGEF2 at late endosomes. {ECO:0000250|UniProtKB:P35739, ECO:0000269|PubMed:1281417}. |
| Mouse PG classification | NA |
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