| Gene Information | |
|---|---|
| Gene Name | COL20A1 |
| Organism | Homo sapiens (Human) |
| Gene Length | 1284 |
| Protein Names | Collagen alpha-1(XX) chain |
| Target Name | NA |
| Target Type | NA |
| Gene Age | 70 ( ENSG00000101203 ) |
| Evolutionary Stage | Eumetazoa |
| AlphaFoldDB | Q9P218 |
| Gene Card | COL20A1 |
| Uniprot ID | Q9P218 |
| Pfam | PF01391; PF00041; PF00092 |
| In ASD | no |
| Allosteric Prediction | no (-1.106849323) |
| Ortholog in Animals | Alpaca_ COL20A1 ( ortholog_one2one ) Macaque_ COL20A1 ( ortholog_one2one ) Mouse_ Col20a1 ( ortholog_one2one ) |
| Ohnologs | COL14A1 |
| Paralogs | COL9A2, COLQ, COL4A1, COL17A1, COL1A1, EDA, COL22A1, COL11A1, COL15A1, COL9A3, COL26A1, COL13A1, COL7A1, COL16A1, COL5A1, COL25A1, COL3A1, COL6A2, COL5A3, COL27A1, COL1A2, COL24A1, COL5A2, COL18A1, COL9A1, COL23A1, COL2A1, COL4A2, COL4A4, COL4A6, COL28A1, COL11A2, COL21A1, COL6A1, EMID1, COL4A5, COL4A3 |
| Tissue | brain, testis, pineal.gland |
| Tissue Specificity | High expression in heart, lung, liver, skeletal muscle, kidney, pancreas, spleen, testis, ovary, subthalamic nucleus and fetal liver. Weak expression in other tissues tested. |
| Pharmacological Animal Models | NA |
| Gene Ontology (biological process) |
|
| Gene Ontology (cellular component) |
|
| Gene Ontology (molecular function) |
|
| PDB | 2DKM (NMR - ) 2EE3 (NMR - ) 2EKJ (NMR - ) 5KF4 (X-ray 2.50A ) |
| DBSNP | rs753686 |
| Subcellular location [CC] | Secreted, extracellular space {ECO:0000305}. |
| Mouse PG classification | NA |
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