| Gene Information | |
|---|---|
| Gene Name | SPRTN |
| Organism | Homo sapiens (Human) |
| Gene Length | 489 |
| Protein Names | DNA-dependent metalloprotease SPRTN (EC 3.4.24.-) (DNA damage protein targeting VCP) (DVC1) (Protein with SprT-like domain at the N terminus) (Spartan) |
| Target Name | NA |
| Target Type | NA |
| Gene Age | 645 ( ENSG00000010072 ) |
| Evolutionary Stage | Eukaryota |
| AlphaFoldDB | Q9H040 |
| Gene Card | SPRTN |
| Uniprot ID | Q9H040 |
| Pfam | PF10263 |
| In ASD | no |
| Allosteric Prediction | no (-1.028080356) |
| Ortholog in Animals | Alpaca_ SPRTN ( ortholog_one2one ) Dog_ SPRTN ( ortholog_one2one ) GuineaPig_ SPRTN ( ortholog_one2one ) Macaque_ SPRTN ( ortholog_one2one ) Mouse_ Sprtn ( ortholog_one2one ) Pig_ SPRTN ( ortholog_one2one ) Rat_ Sprtn ( ortholog_one2one ) Rabbit_ SPRTN ( ortholog_one2one ) |
| Ohnologs | NA |
| Paralogs | NA |
| Tissue | NA |
| Tissue Specificity | NA |
| Pharmacological Animal Models | NULL(Chimpanzee);NULL(Mouse);NULL(Rat);0.066667(Rabbit) |
| Gene Ontology (biological process) |
|
| Gene Ontology (cellular component) |
|
| Gene Ontology (molecular function) |
|
| PDB | 5IY4 (X-ray 2.94A ) 6MDW (X-ray 1.50A ) 6MDX (X-ray 1.55A ) |
| DBSNP | rs527236213 rs2437150 |
| Subcellular location [CC] | Nucleus {ECO:0000269|PubMed:22681887, ECO:0000269|PubMed:22894931, ECO:0000269|PubMed:23042605, ECO:0000269|PubMed:23042607, ECO:0000269|PubMed:27852435}. Chromosome {ECO:0000269|PubMed:22894931, ECO:0000269|PubMed:22902628, ECO:0000269|PubMed:22987070, ECO:0000269|PubMed:23042605, ECO:0000269|PubMed:27852435, ECO:0000269|PubMed:27871365, ECO:0000269|PubMed:27871366, ECO:0000269|PubMed:31316063, ECO:0000269|PubMed:32649882}. Note=Localizes to sites of UV damage via the PIP-box (PubMed:22894931, PubMed:23042605). Recruited to stalled replication forks at sites of replication stress following deubiquitination (PubMed:22894931, PubMed:23042605, PubMed:22987070, PubMed:27871365, PubMed:32649882). CHEK1 stimulates recruitment to chromatin (PubMed:31316063). {ECO:0000269|PubMed:22894931, ECO:0000269|PubMed:22987070, ECO:0000269|PubMed:23042605, ECO:0000269|PubMed:27871365, ECO:0000269|PubMed:31316063, ECO:0000269|PubMed:32649882}. |
| Mouse PG classification | NA |
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