| Gene Information | |
|---|---|
| Gene Name | COL11A1 |
| Organism | Homo sapiens (Human) |
| Gene Length | 1806 |
| Protein Names | Collagen alpha-1(XI) chain |
| Target Name | NA |
| Target Type | NA |
| Gene Age | 645 ( ENSG00000060718 ) |
| Evolutionary Stage | Vertebrata |
| AlphaFoldDB | P12107 |
| Gene Card | COL11A1 |
| Uniprot ID | P12107 |
| Pfam | PF01410; PF01391 |
| In ASD | no |
| Allosteric Prediction | no (-0.130879647) |
| Ortholog in Animals | Alpaca_ COL11A1 ( ortholog_one2one ) Dog_ COL11A1 ( ortholog_one2one ) GuineaPig_ COL11A1 ( ortholog_one2one ) Macaque_ COL11A1 ( ortholog_one2one ) Mouse_ Col11a1 ( ortholog_one2one ) Pig_ COL11A1 ( ortholog_one2one ) Rat_ Col11a1 ( ortholog_one2one ) Rabbit_ COL11A1 ( ortholog_one2one ) |
| Ohnologs | NA |
| Paralogs | COL9A2, COLQ, COL4A1, COL17A1, COL1A1, EDA, COL22A1, COL15A1, COL9A3, COL26A1, COL13A1, COL7A1, COL16A1, COL5A1, COL25A1, COL3A1, COL6A2, COL5A3, COL27A1, COL1A2, COL24A1, COL5A2, COL18A1, COL9A1, COL23A1, COL2A1, COL4A2, COL20A1, COL4A4, COL4A6, COL28A1, COL11A2, COL21A1, COL6A1, EMID1, COL4A5, COL4A3 |
| Tissue | placenta, bone.marrow, dura.mater |
| Tissue Specificity | Cartilage, placenta and some tumor or virally transformed cell lines. Isoforms using exon IIA or IIB are found in the cartilage while isoforms using only exon IIB are found in the tendon. |
| Pharmacological Animal Models | NA |
| Gene Ontology (biological process) |
|
| Gene Ontology (cellular component) |
|
| Gene Ontology (molecular function) |
|
| PDB | NA |
| DBSNP | rs12025888 rs11164663 rs12143815 rs121912943 rs749663226 rs3753841 rs750014974 rs1553193913 rs1553193910 rs1676486 rs1975916 |
| Subcellular location [CC] | Secreted, extracellular space, extracellular matrix {ECO:0000255|PROSITE-ProRule:PRU00793}. |
| Mouse PG classification | NA |
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