Gene Information | |
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Gene Name | CFTR |
Organism | Homo sapiens (Human) |
Gene Length | 1480 |
Protein Names | Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 5.6.1.6) (cAMP-dependent chloride channel) |
Target Name | camp-dependent chloride channel f508 deletion |
Target Type | Successful target |
Gene Age | 1488 ( ENSG00000001626 ) |
Evolutionary Stage | Vertebrata |
AlphaFoldDB | P13569 |
Gene Card | CFTR |
Uniprot ID | P13569 |
Pfam | PF00664; PF00005; PF14396 |
In ASD | yes |
Allosteric Prediction | yes (1.978276066) |
Ortholog in Animals | Alpaca_ CFTR ( ortholog_one2one ) Dog_ CFTR ( ortholog_one2one ) GuineaPig_ CFTR ( ortholog_one2one ) Macaque_ CFTR ( ortholog_one2one ) Mouse_ Cftr ( ortholog_one2one ) Pig_ CFTR ( ortholog_one2one ) Rat_ Cftr ( ortholog_one2one ) Rabbit_ CFTR ( ortholog_one2one ) |
Ohnologs | NA |
Paralogs | ABCC1, ABCC8, ABCC3, ABCC10, ABCC9, ABCC5, ABCC6, ABCC4, ABCC12, ABCC2, ABCC11 |
Tissue | pancreas, small.intestine |
Tissue Specificity | Expressed in the respiratory airway, including bronchial epithelium, and in the female reproductive tract, including oviduct (at protein level) (PubMed:22207244, PubMed:15716351). Detected in pancreatic intercalated ducts in the exocrine tissue, on epithelial cells in intralobular striated ducts in sublingual salivary glands, on apical membranes of crypt cells throughout the small and large intestine, and on the reabsorptive duct in eccrine sweat glands (PubMed:1284548, PubMed:28130590). Detected on the equatorial segment of the sperm head (at protein level) (PubMed:19923167). Detected in nasal and bronchial superficial epithelium (PubMed:15716351). Expressed by the central cells on the sebaceous glands, dermal adipocytes and, at lower levels, by epithelial cells (PubMed:28130590). {ECO:0000269|PubMed:1284548, ECO:0000269|PubMed:15716351, ECO:0000269|PubMed:19923167, ECO:0000269|PubMed:22207244, ECO:0000269|PubMed:28130590}. |
Pharmacological Animal Models | NA |
Gene Ontology (biological process) |
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Gene Ontology (cellular component) |
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Gene Ontology (molecular function) |
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PDB | 1XMI (X-ray 2.25A ) 1XMJ (X-ray 2.30A ) 2BBO (X-ray 2.55A ) 2BBS (X-ray 2.05A ) 2BBT (X-ray 2.30A ) 2LOB (NMR - ) 2PZE (X-ray 1.70A ) 2PZF (X-ray 2.00A ) 2PZG (X-ray 1.80A ) 3GD7 (X-ray 2.70A ) 3ISW (X-ray 2.80A ) 4WZ6 (X-ray 2.05A ) 5D2D (X-ray 2.10A ) 5D3E (X-ray 2.75A ) 5D3F (X-ray 2.74A ) 5TF7 (X-ray 1.93A ) 5TF8 (X-ray 1.86A ) 5TFA (X-ray 1.87A ) 5TFB (X-ray 1.87A ) 5TFC (X-ray 1.92A ) 5TFD (X-ray 1.89A ) 5TFF (X-ray 1.89A ) 5TFG (X-ray 1.91A ) 5TFI (X-ray 1.89A ) 5TFJ (X-ray 1.85A ) 5TGK (X-ray 1.91A ) 5UAK (EM 3.87A ) 6GJQ (X-ray 2.49A ) 6GJS (X-ray 1.95A ) 6GJU (X-ray 2.60A ) 6GK4 (X-ray 2.91A ) 6GKD (X-ray 2.99A ) 6HEP (X-ray 1.86A ) 6MSM (EM 3.20A ) 6O1V (EM 3.20A ) 6O2P (EM 3.30A ) 6UK1 (X-ray 2.69A ) 6WBS (X-ray 1.86A ) 6ZE1 (X-ray 2.71A ) 7QI1 (X-ray 1.76A ) 7SV7 (EM 3.80A ) 7SVD (EM 2.70A ) 7SVR (EM 3.90A ) |
DBSNP | rs397508635 rs1800073 rs149353983 rs143456784 rs1800074 rs1800074 rs397508220 rs397508272 rs368505753 rs115545701 rs1800076 rs75961395 rs397508403 rs121908750 rs121908751 rs397508464 rs121909031 rs113993958 rs140502196 rs77834169 rs78655421 rs78655421 rs78655421 rs201958172 rs1800078 rs76371115 rs397508700 rs35516286 rs397508718 rs1800079 rs80282562 rs1800080 rs397508759 rs397508765 rs121908802 rs121908803 rs121908752 rs397508780 rs397508783 rs397508790 rs191456345 rs397508804 rs143486492 rs150691494 rs397508817 rs121909016 rs75763344 rs397508819 rs1800085 rs121909011 rs397508139 rs77409459 rs397508146 rs77932196 rs77932196 rs77932196 rs1800086 rs121908753 rs1800087 rs397508152 rs76879328 rs147422190 rs74551128 rs397508195 rs121909009 rs1800089 rs213950 rs79282516 rs121909017 rs397508223 rs1800092 rs1800091 rs1801178 rs121908745 rs74571530 rs121909001 rs397508225 rs77646904 rs35032490 rs397508241 rs121908755 rs121908755 rs121909005 rs75527207 rs121909013 rs121909044 rs75789129 rs193922504 rs75549581 rs80055610 rs397508267 rs80055610 rs121909047 rs1800097 rs1800097 rs121909006 rs397508277 rs397508276 rs397508276 rs397508280 rs397508282 rs121908758 rs1800098 rs397508288 rs397508306 rs766874 rs397508311 rs201978662 rs201124247 rs139468767 rs397508313 rs397508314 rs397508315 rs121908759 rs397508316 rs397508318 rs121909033 rs780526529 rs1800099 rs1177201180 rs1800100 rs397508338 rs150157202 rs397508363 rs145449046 rs397508373 rs1800103 rs397508378 rs397508381 rs193922506 rs1800106 rs1800107 rs121909034 rs121909008 rs397508428 rs193922511 rs121909035 rs151048781 rs397508448 rs1800110 rs141033578 rs1800111 rs397508479 rs397508480 rs193922516 rs1800112 rs200553511 rs144055758 rs150212784 rs142394380 rs121909036 rs121909036 rs78194216 rs121909019 rs121909019 rs121909020 rs1800114 rs200321110 rs78769542 rs78769542 rs202179988 rs121909037 rs139304906 rs79635528 rs397508531 rs36210737 rs36210737 rs397508553 rs397508557 rs75541969 rs397508567 rs1800120 rs1800123 rs75389940 rs34911792 rs267606723 rs121909040 rs74503330 rs121909041 rs11971167 rs397508616 rs77902683 rs121909028 rs121909015 rs397508621 rs121909042 rs80034486 rs193922525 rs113857788 rs397508670 rs397508691 rs4148725 |
Subcellular location [CC] | Apical cell membrane {ECO:0000269|PubMed:12519745, ECO:0000269|PubMed:12529365, ECO:0000269|PubMed:1284548, ECO:0000269|PubMed:15247260, ECO:0000269|PubMed:15716351, ECO:0000269|PubMed:17462998, ECO:0000269|PubMed:19398555, ECO:0000269|PubMed:19621064, ECO:0000269|PubMed:20008117, ECO:0000269|PubMed:22207244, ECO:0000269|PubMed:28130590}; Multi-pass membrane protein {ECO:0000269|Ref.55}. Early endosome membrane {ECO:0000269|PubMed:19398555, ECO:0000269|PubMed:20008117}; Multi-pass membrane protein {ECO:0000269|Ref.55}. Cell membrane {ECO:0000269|PubMed:10792060, ECO:0000269|PubMed:11524016, ECO:0000269|PubMed:11707463, ECO:0000269|PubMed:12588899, ECO:0000269|PubMed:15010471, ECO:0000269|PubMed:17036051, ECO:0000269|PubMed:1712898, ECO:0000269|PubMed:17182731, ECO:0000269|PubMed:19019741, ECO:0000269|PubMed:19398555, ECO:0000269|PubMed:21884936, ECO:0000269|PubMed:22178883, ECO:0000269|PubMed:25330774, ECO:0000269|PubMed:26846474, ECO:0000269|PubMed:28001373, ECO:0000269|PubMed:28067262, ECO:0000269|PubMed:28087700, ECO:0000269|PubMed:28130590, ECO:0000269|PubMed:9804160, ECO:0000305|PubMed:8910473}; Multi-pass membrane protein {ECO:0000269|Ref.55}. Recycling endosome membrane {ECO:0000305|PubMed:17462998}; Multi-pass membrane protein {ECO:0000269|Ref.55}. Endoplasmic reticulum membrane {ECO:0000269|PubMed:11707463, ECO:0000269|PubMed:25330774}; Multi-pass membrane protein {ECO:0000269|Ref.55}. Nucleus {ECO:0000250|UniProtKB:P34158}. Note=The channel is internalized from the cell surface into an endosomal recycling compartment, from where it is recycled to the cell membrane (PubMed:17462998, PubMed:19398555, PubMed:20008117). In the oviduct and bronchus, detected on the apical side of epithelial cells, but not associated with cilia (PubMed:22207244). In Sertoli cells, a processed product is detected in the nucleus (By similarity). ER stress induces GORASP2-mediated unconventional (ER/Golgi-independent) trafficking of core-glycosylated CFTR to cell membrane (PubMed:21884936). {ECO:0000250|UniProtKB:P34158, ECO:0000269|PubMed:19398555, ECO:0000269|PubMed:20008117, ECO:0000269|PubMed:21884936, ECO:0000269|PubMed:22207244, ECO:0000305|PubMed:17462998}. |
Mouse PG classification | HPG |
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